Recovery and evolutionary analysis of complete integron gene cassette arrays from Vibrio
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Summary
An approach to systematically isolate, sequence and annotate large integron gene cassette arrays from bacterial strains and identifies a relationship between the phylogenetic distance separating two species and the rate at which they exchange gene cassettes, interactions between the non-mobile portion of bacterial genomes and the vibrio gene cassette pool as well as intragenomic translocation events of integrons in vibrios.
- Type
- article
- Published
- 2006-01-18
- Cited by
- 65
- References
- 30
- Access
- Open access
- OpenAlex
- https://openalex.org/W1767360726
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:412958
Keywords
Integron, Gene cassette, Biology, Horizontal gene transfer, Genetics
References
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- Recombination Activity of a Distinctive Integron-Gene Cassette System Associated with Pseudomonas stutzeri Populations in Soil
- Gene cassettes from the insert region of integrons are excised as covalently closed circles
- Integrons in Xanthomonas: a source of species genome diversity.
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- Structure and function of 59‐base element recombination sites associated with mobile gene cassettes
- Mobile Gene Cassettes and Integrons in Evolution
- Plasmid evolution by acquisition of mobile gene cassettes: plasmid pIE723 contains the aadB gene cassette precisely inserted at a secondary site in the IncQ plasmid RSF1010
- Mobile Gene Cassettes: A Fundamental Resource for Bacterial Evolution
- Identification and cloning of a tetracycline resistance gene from the fish pathogen Vibrio salmonicida
- Gene Cassette PCR: Sequence-Independent Recovery of Entire Genes from Environmental DNA
- MODELTEST: testing the model of DNA substitution
- CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice.
- DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
- The evolutionary history of chromosomal super-integrons provides an ancestry for multiresistant integrons.
- Comparative Study of Class 1 Integron and Vibrio cholerae Superintegron Integrase Activities
- Complete genome sequence of Vibrio fischeri: a symbiotic bacterium with pathogenic congeners.
- Comparative analysis of superintegrons: engineering extensive genetic diversity in the Vibrionaceae.
- Comparative genome analysis of Vibrio vulnificus, a marine pathogen.
Cited by
- The integron/gene cassette system: an active player in bacterial adaptation.
- Mobile genetic elements of nosocomial pathogens
- Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons
- Integration of a laterally acquired gene into a cell network important for growth in a strain of Vibrio rotiferianus
- Shape and evolution of the fundamental niche in marine Vibrio
- Integrase-directed recovery of functional genes from genomic libraries
- What are superintegrons?
- Integron-associated gene cassettes in Halifax Harbour: assessment of a mobile gene pool in marine sediments.
- Integrons: Past, Present, and Future
- Epidemic Mortality of the Sponge Ircinia variabilis (Schmidt, 1862) Associated to Proliferation of a Vibrio Bacterium
- Surface Immuno-Functionalisation for the Capture and Detection of Vibrio Species in the Marine Environment: A New Management Tool for Industrial Facilities
- A mobile genetic element in Serratia marcescens, a causative agent of onion disease
- Integrons: mobilizable platforms that promote genetic diversity in bacteria.
- Context-driven discovery of gene cassettes in mobile integrons using a computational grammar
- A Recalibrated Molecular Clock and Independent Origins for the Cholera Pandemic Clones
- Application of an ELISA-type amperometric assay to the detection of Vibrio species with screen-printed electrodes
- New Array of aacA4-catB3-dfrA1 Gene Cassettes and a Noncoding Cassette from a Class-1-Integron-Positive Clinical Strain of Pseudomonas aeruginosa
- Deletion of Integron-Associated Gene Cassettes Impact on the Surface Properties of Vibrio rotiferianus DAT722
- Vibrio2005: the First International Conference on the Biology of Vibrios
- Integrons: agents of bacterial evolution
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