Error detection for genetic data, using likelihood methods.

Keywords

Pedigree chart, Statistics, Type I and type II errors, Statistic, Genotyping

References

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• Molecular and statistical approaches to the detection and correction of errors in genotype databases.Linda M. Brzustowicz, Chantal Mérette, Xiao Xun Xie — 1993
• Faster sequential genetic linkage computations.Robert W. Cottingham, Ramana M. Idury, Alejandro A. Schäffer — 1993
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• Analysis of Human Genetic LinkageA. W. F. Edwards, J. Ott — 1985
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• Standard maps of chromosome 10Newton E. Morton, Andrew Collins — 1990
• ERROR DETECTION IN GENETIC LINKAGE DATA FOR HUMAN PEDIGREES USING LIKELIHOOD RATIO METHODSMargaret G. Ehm, Marek Kimmel, Robert W. Cottingham — 1995
• Systematic detection of errors in genetic linkage data.Stephen E. Lincoln, Eric S. Lander — 1992
• The CEPH consortium linkage map of human chromosome 1.Nicholas C. Dracopoli, P. O’Connell, Tami Elsner — 1991
• Influence of aberrant observations on high-resolution linkage analysis outcomes.Kenneth H. Buetow — 1991

Cited by

• Factors affecting statistical power in the detection of genetic association.M. Gershenzon, V. N. Gubankov — 2005
• Improving Estimates of Genetic Maps: A Maximum Likelihood ApproachJ. Backovsky, Stanley B. Martin, R. G. Mckee — 2006
• Fine mapping of the nail-patella syndrome locus at 9q34.Iain McIntosh, Mark V. Clough, Alejandro A. Schäffer — 1997
• Major strengths and weaknesses of the lod score method.Jürg Ott — 2001
• On the value of Mendelian laws of segregation in families: data quality control, imputation and beyondElizabeth M. Blue, Lei Sun, Nathan Tintle — 2014
• Identifying marker typing incompatibilities in linkage analysis.Heather M. Stringham, Michael Boehnke — 1996
• Implications of evolutionary history and population structure for the analysis of quantitative trait loci in the ancient conifer Araucaria cunninghamiiLeon J Scott — 2004
• Characterization of polycystic kidney disease in the Lewis Polycystic Kidney ratJada Pasquale Yengkopiong — 2010
• Power loss for multiallelic transmission/disequilibrium test when errors introduced: GAW11 simulated dataDerek Gordon, Tara C. Matise, Simon Heath — 1999
• Desarrollo de un mapa genético con marcadores AFLP y microsatélite en rodaballo ("Scophthalmus maximus L.")González Fortes, Gloria María — 2011
• Genotyping error detection through tightly linked markers.Guohua Zou, Deyun Pan, Hongyu Zhao — 2003
• Detecting low‐quality markers using map expandersClaus Thorn Ekstrøm — 2003
• The reliability of the Aspergillus nidulans physical map.Rolf A. Prade — 2000
• Application of Homozygosity Haplotype Analysis to Genetic Mapping with High-Density SNP Genotype DataHaiyan Jiang, Andrew Orr, Duane L. Guernsey — 2009
• A Family-Based Likelihood Ratio Test for General Pedigree Structures That Allows for Genotyping Error and Missing DataYang Yang, Carol A. Wise, Derek Gordon — 2008
• Detection of genotyping errors and pseudo‐SNPs via deviations from Hardy‐Weinberg equilibriumSuzanne M. Leal — 2005
• Deviations from Hardy-Weinberg Equilibrium in Parental and Unaffected Sibling Genotype DataBingshan Li, Suzanne M. Leal — 2008
• Associating phenotypes with molecular events: recent statistical advances and challenges underpinning microarray experimentsYulan Liang, Arpad Kelemen — 2005
• Three-point appraisal of genetic linkage mapsWalter R. Gilks, S. J. Welham, Jun Wang — 2012
• Power and Sample Size Calculations for Case-Control Genetic Association Tests when Errors Are Present: Application to Single Nucleotide PolymorphismsDerek Gordon, Stephen J. Finch, Michael Nothnagel — 2002

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