Protein modeling and molecular dynamics simulation of the two novel surfactant proteins SP-G and SP-H
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Summary
The here presented modeling was fundamental for experimental localization studies and the simulations showed that SP-G and SP-H are theoretically able to interact with lipid systems and thus are members of the surfactant protein family.
- Type
- article
- Published
- 2014-11-09
- Cited by
- 16
- References
- 90
- Access
- Open access
- OpenAlex
- https://openalex.org/W25381619
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:26759503
Keywords
Set (abstract data type), Top-down and bottom-up design, Work (physics), Economic model, Government (linguistics)
References
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- GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation.
- Signal peptide prediction based on analysis of experimentally verified cleavage sites
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- Detection of surfactant proteins A and D in human tear fluid and the human lacrimal system.
- Constant pressure molecular dynamics for molecular systems
- Molecular dynamics study of the lung surfactant peptide SP-B1-25 with DPPC monolayers: insights into interactions and peptide position and orientation.
- Orientation and depth of surfactant protein B C-terminal helix in lung surfactant bilayers.
- Interfacial Reactions of Ozone with Surfactant Protein B in a Model Lung Surfactant System
- PROCHECK: a program to check the stereochemical quality of protein structures
- Canonical dynamics: Equilibrium phase-space distributions.
- CELLmicrocosmos 2.2 MembraneEditor: A Modular Interactive Shape-Based Software Approach To Solve Heterogeneous Membrane Packing Problems
- The molecular mechanism of monolayer-bilayer transformations of lung surfactant from molecular dynamics simulations.
- “SP-G”, a Putative New Surfactant Protein – Tissue Localization and 3D Structure
- Theory and range of modern semiempirical molecular orbital methods
Cited by
- Computer simulations of lung surfactant.
- Recombinant expression of surfactant protein H (SFTA3) in Escherichia coli.
- The importance of surfactant proteins-New aspects on macrophage phagocytosis.
- Expression of recombinant surfactant protein SFTA3 in the human kidney cell line HEK 293T.
- Analysis of comparison between sequential and parallel computation using openmp for Molecular Dynamic Simulation
- Examining the role of the surfactant family member SFTA3 in interneuron specification
- Expression of Surfactant Proteins in the Human Canaliculus: Evidence and Potential Insights Into the Tear Flow Dynamics.
- Progesterone Antagonizes Dexamethasone-Regulated Surfactant Proteins In Vitro
- Synthetic surfactants with SP‐B and SP‐C analogues to enable worldwide treatment of neonatal respiratory distress syndrome and other lung diseases
- Surfactant proteins: Role in lacrimal drainage disorders.
- Altered Surfactant Protein Expression in Primary Acquired Nasolacrimal Duct Obstruction.
- Characterization of Lipid-Protein Interactions and Lipid-mediated Modulation of Membrane Protein Function Through Molecular Simulation
- The Vesicle Builder - A Membrane Packing Algorithm for the CELLmicrocosmos MembraneEditor
- The Potential Role of SP-G as Surface Tension Regulator in Tear Film: From Molecular Simulations to Experimental Observations
- Decoding Drug Discovery: Exploring A-to-Z In Silico Methods for Beginners
- Advances in the effect of the structure of high-moisture extruded plant-based meat on in vitro digestive properties.
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