Development of Microsatellite Markers in Pungtungia herzi Using Next-Generation Sequencing and Cross-Species Amplification in the Genus Pseudopungtungia
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Summary
Results indicated that developing microsatellite markers for cross-amplification from a species that is abundant and phylogenetically close to the species of interest is a good alternative when tissue samples of an endangered species are insufficient to develop microsatellites.
- Type
- article
- Published
- 2013-10-01
- Cited by
- 3
- References
- 31
- Access
- Open access
- OpenAlex
- https://openalex.org/W24084733
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:18907430
Keywords
Silicon, Materials science, Thin film, Oxide, Optoelectronics
References
- Microsatellites Cross-Species Amplification across Some African Cichlids
- Fast and Cost-Effective Mining of Microsatellite Markers Using NGS Technology: An Example of a Korean Water Deer Hydropotes inermis argyropus
- Rapid screening and comparison of human microsatellite markers in baboons: allele size is conserved, but allele number is not.
- Countertactics of the japanese aucha perchsiniperca kawamebari against brood parasitism by the japanese minnowpungtungia herzi
- Flexibility of reproductive tactics and their consequences in the brood parasitic fish Pungtungia herzi (Teleostei: Cyprinidae).
- Cross-species amplification of microsatellite markers for the brown sole in the family Pleuronectidae
- Micro-Checker: Software for identifying and correcting genotyping errors in microsatellite data
- An economic method for the fluorescent labeling of PCR fragments
- Microsatellites in different eukaryotic genomes: survey and analysis.
- Phylogeny of the gudgeons (Teleostei: Cyprinidae: Gobioninae).
- Rise of the machines – recommendations for ecologists when using next generation sequencing for microsatellite development
- Microsatellites, from molecules to populations and back.
- Arlequin (version 3.0): An integrated software package for population genetics data analysis
- Conservation of Wildlife Populations: Demography, Genetics, and Management
- Cross-species amplification of Bovidae microsatellites and low diversity of the endangered Korean goral.
- Bioinformatically mined simple sequence repeats in UniGene of Citrus sinensis
- Conservation of Wildlife Populations: Demography, Genetics and Management
- Reproductive ecology and early life history of the bagrid catfish, Pseudobagrus nudiceps
- Microsatellites: Evolutionary and methodological background and empirical applications at individual, population, and phylogenetic levels
- Genetic Diversity and Population Structure of the Endangered Fish Pseudopungtungia nigra (Cyprinidae) from the Geum and Mankyung Rivers Assessed by Amplified Fragment Length Polymorphism
Cited by
- Characterization of 11 novel polymorphic microsatellite loci in the threatened Korean loach, Iksookimia koreensis, isolated using a next-generation sequencing method
- Tumoricidal Effect of Hematite (α-Fe2O3) and SiO2 Nanoparticles in Human Rhabdomyosarcoma Cell Line
- Genetic Diversity of the Slender Shinner (Pseudopuntungia tenuicorpa) and Its Conservational Implications
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