VectorBase: improvements to a bioinformatics resource for invertebrate vector genomics

Keywords

Political science

References

• Gramene database: a hub for comparative plant genomics.Pankaj Jaiswal — 2011
• Anatomical ontologies of mosquitoes and ticks, and their web browsers in VectorBasePantelis Topalis, C. Tzavlaki, K. Vestaki — 2008
• MIRO and IRbase: IT Tools for the Epidemiological Monitoring of Insecticide Resistance in Mosquito Disease VectorsEmmanuel Dialynas, Pantelis Topalis, John Vontas — 2009
• GDR (Genome Database for Rosaceae): integrated web-database for Rosaceae genomics and genetics dataSook Jung, Margaret Staton, T. Lee — 2007
• SNP Genotyping Defines Complex Gene-Flow Boundaries Among African Malaria Vector MosquitoesDaniel E. Neafsey, Mara Lawniczak, Daniel J. Park — 2010
• EuPathDB: a portal to eukaryotic pathogen databasesCristina Aurrecoechea, John Brestelli, Brian P. Brunk — 2009
• VectorBase: a data resource for invertebrate vector genomicsDaniel Lawson, Peter Arensburger, Peter W. Atkinson — 2008
• The Sol Genomics Network (solgenomics.net): growing tomatoes using PerlAureliano Bombarely, Naama Menda, Isaak Tecle — 2010
• Fast and SNP-tolerant detection of complex variants and splicing in short readsThomas D. Wu, Şerban Nacu — 2010
• Database resources of the National Center for Biotechnology Information: updateDavid Wheeler — 2004
• GMAP: a genomic mapping and alignment program for mRNA and EST sequenceTing‐Di Wu, C.K. Watanabe — 2005
• The Sequence Alignment/Map format and SAMtoolsHeng Li, Bob Handsaker, Alec Wysoker — 2009
• The OBO Foundry: coordinated evolution of ontologies to support biomedical data integrationBarry Smith, Michael Ashburner, Cornelius Rosse — 2007
• Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomicsPeter Arensburger, Karyn Mégy, Robert M. Waterhouse — 2010
• Spontaneous mapping of number and space in adults and young childrenMaria-Dolores de Hevia, Elizabeth S. Spelke — 2008
• ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community levelPhilippe Rocca‐Serra, Marco Brandizi, Eamonn Maguire — 2010
• EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates.Albert J. Vilella, Jessica Severin, Abel Ureta-Vidal — 2009
• National Institute of Allergy and Infectious Diseases Bioinformatics Resource Centers: New Assets for Pathogen InformaticsJ. M. Greene, Frank Collins, Elliot J. Lefkowitz — 2007
• Widespread divergence between incipient Anopheles gambiae species revealed by whole genome sequencesMara Lawniczak, Scott Emrich, Alisha K. Holloway — 2010
• IDOMAL: an ontology for malariaPantelis Topalis, Elvira Mitraka, Ioana Bujila — 2010

Cited by

• Gene expression divergence between malaria vector sibling species Anopheles gambiae and An. coluzzii from rural and urban Yaoundé CameroonAi Siti Saodah — 2014
• Contrasting host-pathogen interactions and genome evolution in two generalist and specialist microsporidian pathogens of mosquitoesChristopher A. Desjardins, Neil D. Sanscrainte, Jonathan M. Goldberg — 2015
• Population structure and genome-wide association in the malaria vectors Anopheles gambiae and Anopheles coluzziiSeth Redmond — 2015
• Transcriptomic and proteomic analysis of arbovirus-infected tick cellsSabine Weisheit — 2014
• The evolution and expression of Drosophila meiosis genesD. Beekman — 2013
• Transposition burst of mariner-like elements in the sequenced genome of Rhodnius prolixus.Rita D Fernández-Medina, Adriana Granzotto, José M. C. Ribeiro — 2016
• Whole genome capture of vector-borne pathogens from mixed DNA samples: a case study of Borrelia burgdorferiGiovanna Carpi, Katharine S. Walter, Stephen J. Bent — 2015
• Characterization of the doublesex gene within the Culex pipiens complex suggests regulatory plasticity at the base of the mosquito sex determination cascadeDana C. Price, Andrea Egizi, Dina M. Fonseca — 2015
• In-depth characterization of trypsin-like serine peptidases in the midgut of the sugar fed Culex quinquefasciatusAndré Borges-Veloso, Leonardo Sabóia‐Vahia, Geovane Dias-Lopes — 2015
• Gene Model Annotations for Drosophila melanogaster: The Rule-BendersMadeline A. Crosby, L. Sian Gramates, Gilberto dos Santos — 2015
• Genome sequence of the Asian Tiger mosquito, Aedes albopictus, reveals insights into its biology, genetics, and evolutionXiao‐Guang Chen, Xuanting Jiang, Jinbao Gu — 2015
• The evolutionary landscape of intergenic trans-splicing events in insectsYimeng Kong, Hongxia Zhou, Yao Yu — 2015
• Balancing Thread-Level and Task-Level Parallelism for Data-Intensive Workloads on Clusters and CloudsOlivia Choudhury, Dinesh Rajan, Nicholas Hazekamp — 2015
• Role of semaphorin-1a in the developing visual system of the disease vector mosquito Aedes aegyptiKeshava Mysore, Ellen Flannery, Matthew T. Leming — 2014
• Characterization of the target of ivermectin, the glutamate-gated chloride channel, from Anopheles gambiaeJacob I. Meyers, Meg Gray, Wojtek Kuklinski — 2015
• KONAGAbase: a genomic and transcriptomic database for the diamondback moth, Plutella xylostellaAkiya Jouraku, Kimiko Yamamoto, Seigo Kuwazaki — 2013
• Crepuscular Behavioral Variation and Profiling of Opsin Genes in Anopheles gambiae and Anopheles stephensi (Diptera: Culicidae)Adam M. Jenkins, Marc A. T. Muskavitch — 2015
• IrFC - An Ixodes ricinus injury-responsive molecule related to Limulus Factor C.Veronika Urbanová, David J. Hartmann, Lenka Grunclová — 2014
• Time-of-day specific changes in metabolic detoxification and insecticide resistance in the malaria mosquito Anopheles gambiae.Nathaniel Balmert, Samuel S. C. Rund, John P. Ghazi — 2014
• Genome-wide QTL mapping of saltwater tolerance in sibling species of Anopheles (malaria vector) mosquitoesHilary A. Smith, Bradley J. White, Peter Kundert — 2015

Related papers

No related papers recorded.