Alignment-free prediction of mycobacterial DNA promoters based on pseudo-folding lattice network or star-graph topological indices
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Summary
This work proposes two DNA promoter QSAR models based on pseudo-folding lattice network (LN) and star-graphs (SG) topological indices based on pseudo-folding lattice network (LN) and star-graphs (SG) topological indices.
- Type
- article
- Published
- 2008-10-17
- Cited by
- 36
- References
- 131
- OpenAlex
- https://openalex.org/W18992259
- Semantic Scholar
- https://api.semanticscholar.org/CorpusID:23052848
Keywords
Magnetic bearing, Halbach array, Maglev, Magnetic levitation, Rotor (electric)
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Cited by
- MultiP-Apo: A Multilabel Predictor for Identifying Subcellular Locations of Apoptosis Proteins
- Towards an Information Theory of Complex Networks - Statistical Methods and Applications
- A Graphical and Numerical Approach for Functional Annotation and Phylogenetic Inference
- Predicting promoters by pseudo-trinucleotide compositions based on discrete wavelets transform.
- Fragment-Based Optimization of Small Molecule CXCL12 Inhibitors for Antagonizing the CXCL12/CXCR4 Interaction
- Characterization of structure-antioxidant activity relationship of peptides in free radical systems using QSAR models: key sequence positions and their amino acid properties.
- Markov mean properties for cell death-related protein classification.
- Star Graphs of Protein Sequences and Proteome Mass Spectra in Cancer Prediction
- Current drug design of anti-HIV agents through the inhibition of C-C chemokine receptor type 5.
- A novel descriptor of protein sequences and its application.
- An Alignment-Free Approach for Eukaryotic ITS2 Annotation and Phylogenetic Inference
- Protein functional class prediction using global encoding of amino acid sequence.
- In Silico Study of Rotavirus VP7 Surface Accessible Conserved Regions for Antiviral Drug/Vaccine Design
- A network-QSAR model for prediction of genetic-component biomarkers in human colorectal cancer.
- Prediction of subcellular location of mycobacterial protein using feature selection techniques
- Ontologies in medicinal chemistry: current status and future challenges.
- Kernel-based feature selection techniques for transport proteins based on star graph topological indices.
- Kinetic plasticity and the determination of product ratios for kinetic schemes leading to multiple products without rate laws — New methods based on directed graphs
- Star network analysis of sequence based identified Yarrowia lipolytica strains
- Cellular automata and its applications in protein bioinformatics.
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