Genomic perspectives in microbial oceanography

Keywords

Modal, Commodity, Order (exchange), Transport engineering, Revealed preference

References

• Reverse Methanogenesis: Testing the Hypothesis with Environmental GenomicsSteven Hallam, Nik Putnam, Christina M. Preston — 2004
• Novel major archaebacterial group from marine planktonJed A. Fuhrman, Kirk McCallum, Alison A. Davis — 1992
• Use of nuclepore filters for counting bacteria by fluorescence microscopyJohn E. Hobbie, Ralph J. Daley, S. Jasper — 1977
• Bacterial photosynthesis in surface waters of the open oceanZbigniew Kolber, Cindy Lee Van Dover, Robert A. Niederman — 2000
• Cellular nucleotide measurements and applications in microbial ecology.David M. Karl — 1980
• Measurement of Microbial Activity and Growth in the Ocean by Rates of Stable Ribonucleic Acid SynthesisDavid M. Karl — 1979
• Evolutionary Origins of Genomic Repertoires in BacteriaEmmanuelle Lerat, Vincent Daubin, Howard Ochman — 2005
• Chroococcoid cyanobacteria in the sea: A ubiquitous and diverse phototrophic biomass1Paul W. Johnson, John McN. Sieburth — 1979
• Marine phage genomics.John H. Paul, Matthew B. Sullivan, Anca M. Segall — 2002
• Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells.Edward F. DeLong, Gene S. Wickham, Norman R. Pace — 1989
• Thymidine incorporation as a measure of heterotrophic bacterioplankton production in marine surface waters: Evaluation and field resultsJed A. Fuhrman, Farooq Azam — 1982
• Archaeal dominance in the mesopelagic zone of the Pacific OceanM. Karner, Edward F. DeLong, David M. Karl — 2001
• The genome of a motile marine SynechococcusBrian Palenik, Bianca Brahamsha, Frank W. Larimer — 2003
• Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiationGabrielle Rocap, Frank W. Larimer, Jane E. Lamerdin — 2003
• Analysis of Hydrothermal Vent-Associated Symbionts by Ribosomal RNA SequencesDavid A. Stahl, David Lane, Gary J. Olsen — 1984
• Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genomeAlexis Dufresne, Marcel Salanoubat, Frédéric Partensky — 2003
• High abundance of viruses found in aquatic environmentsØivind Bergh, Knut Yngve Børsheim, Gunnar Bratbak — 1989
• The Ocean's Food Web, A Changing ParadigmLawrence R. Pomeroy — 1974
• From genes to ecosystems: the ocean's new frontierScott C. Doney, Mark R. Abbott, John J. Cullen — 2004
• Highly variable Northern Hemisphere temperatures reconstructed from low- and high-resolution proxy dataAnders Moberg, D. M. Sonechkin, Karin Holmgren — 2005

Cited by

• Differentially expressed genes reveal adaptations between free-living and symbiotic niches of Vibrio fischeri in a fully established mutualism.Bryan W. Jones, Michele K. Nishiguchi — 2006
• Molecular ecology and transcriptomics of marine photosynthetic picoeukaryotesJohn K. Pearman — 2012
• Microbial biodiversity in a wooded riparian zone specificallydesigned for enhancing denitrification processM. Rahman — 2011
• Marine microbial eukaryotic diversity, with particular reference to fungi: Lessons from prokaryotesSeshagiri Raghukumar — 2006
• マイクロビアル・プールと生物多様性 ( ミクロな世界からの新展開)三木 健, 松井 一彰, 横川 太一 — 2007
• Dynamique bactérienne en Manche orientale - Relations avec les poussées de Phaeocystis globosa.Dominique Lamy — 2006
• Bioinformatic methods for the analysis and comparison of metagenomes and metatranscriptomesChristina Ander — 2014
• Microbial diversity, metagenomics and the Yucatán aquifer.Rafael Rojas-Herrera, Marcela Zamudio-Maya, L Arena-Ortiz — 2011
• Construction and screening of marine metagenomic libraries.Nancy G. Weiland, Carolin R. Löscher, Rebekka Metzger — 2010
• Transcription regulation in the hyperthermophilic crenarchaeon Thermoproteus tenax strain Kra1Jeannette Marrero Coto — 2010
• Diversidade de bactérias associadas ao muco do zoantídeo Palythoa Caribaeorum (Cnidaria, Anthozoa) do litoral sul de PernambucoFelipe Ferreira Campos — 2011
• Study of Secondary Metabolite Gene Expression in Marine Microbial Co-Cultures Using Quantitative Real-Time PCRC. Conway — 2010
• Construction and preliminary analysis of a metagenomic library from a deep-sea sediment of east Pacific Nodule Province.Meixiang Xu, Fengping Wang, Jun Meng — 2007
• An experimental metagenome data management and analysis systemVictor Markowitz, Natalia Ivanova, Krishna Palaniappan — 2006
• Mikrobielle Diversität in BiogasreaktorenKhadidja Souidi — 2008
• Diversity and Distribution of Archaea in the Mangrove Sediment of SundarbansAnish Bhattacharyya, Niladri Shekhar Majumder, Pijush Basak — 2015
• Algal chemical ecologyCharles D. Amsler — 2008
• Physiological and genetic analyses reveal a mechanistic insight into the multifaceted lifestyles of Pseudoalteromonas sp. SM9913 adapted to the deep-sea sediment.Zihao Mi, Zichao Yu, Hai‐Nan Su — 2015
• The green impact: bacterioplankton response toward a phytoplankton spring bloom in the southern North Sea assessed by comparative metagenomic and metatranscriptomic approachesBernd Wemheuer, Franziska Wemheuer, Jacqueline Hollensteiner — 2015
• Spatial and temporal variation of microbial community structure in surficial sediments of Cochin estuaryJoseph Neetha, A. Shanta — 2012

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